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pets 0.2.4

PETS suite includes three different tools. CohortAnalyzer performs the calculation of several statistics that gives an overview of a cohort of patients to analyse. Reg2Phen uses associations between pathological phenotypes and regions of the genome (these associations can be calculated from the cohort of patients if they include genotypic & phenotypic information using NetAnalyzer, another Ruby gem) to find, for a given genomic region, which pathological phenotypes have been associated with that region. The third tool, Phen2Reg, is a predictor that using the same associations as Reg2Phen, predicts which genomic regions can be the cause of a list of pathological phenotypes observed in a patient.

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Versionen:

  1. 0.2.5 August 04, 2023 (134 MB)
  2. 0.2.4 May 23, 2022 (134 MB)
  3. 0.2.3 June 09, 2021 (134 MB)
  4. 0.1.4 November 04, 2019 (116 MB)
  5. 0.1.3 October 28, 2019 (116 MB)
Zeige alle Versionen (6 total)

Runtime Abhängigkeiten (8):

expcalc >= 0
npy >= 0
parallel ~> 1.20.1
semtools ~> 0.1.0

Development Abhängigkeiten (3):

bundler ~> 2.0
rake ~> 13.0.3
rspec ~> 3.10.0

Besitzer:

Pushed by:

Autoren:

  • Elena Rojano, Pedro Seoane

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Downloads insgesamt 8.940

Für diese Version 968

Version veröffentlicht:

Lizenz:

MIT

Erforderliche Ruby-Version: >= 0

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