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anncrsnp 0.1.3

AnNCR-SNP integrates data from various sources, allowing the user to investigate the potential effects of variants in non-coding regions of the human genome. AnNCR-SNP consists of a database containing data on all non-coding elements and two main programs: manager and finder. The manager program is responsible for creating the local data-base, and the finder program receives the user queries in order to search in the local database and retrieve information. The user can find information about various regu-latory elements, such as TFBs, open chromatin, histone modification and methyla-tion sites, information about SNPs from dbSNP and gene information from RefSeq.

Gemfile:
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install:
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Versions:

  1. 0.1.7 September 28, 2016 (27 KB)
  2. 0.1.6 July 25, 2016 (20 KB)
  3. 0.1.5 July 22, 2016 (20 KB)
  4. 0.1.4 July 20, 2016 (20 KB)
  5. 0.1.3 July 20, 2016 (19 KB)
Show all versions (8 total)

Runtime Dependencies (2):

rubyzip >= 0
sqlite3 >= 0

Development Dependencies (3):

bundler ~> 1.10
rake ~> 10.0
rspec >= 0

Owners:

Authors:

  • Elena Rojano, Pedro Seoane

SHA 256 checksum:

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Total downloads 20,951

For this version 2,306

Version Released:

License:

MIT

Required Ruby Version: >= 0

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